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Database of Molecular Motions : ウィキペディア英語版
Database of Molecular Motions

== Description ==
The Database of Macromolecular Motions ((molmovdb) ) is a bioinformatics database that attempts to
categorize macromolecular motions, sometimes also known as conformational change.
It was original developed by Mark B. Gerstein, Werner Krebs, and Nat Echols in
the Molecular Biophysics & Biochemistry Department at Yale University.
Users can search the database for a particular motion by either protein name or Protein Data Bank ID number. Typically,
however, users will enter the database via the Protein Data Bank, which often provides a hyperlink to the molmovdb
entry for proteins found in both databases.
The
database includes a web-based tool (the Morph server) which allows
non-experts to
animate and visualize certain types of protein conformational change through the generation of short movies (8).
This system uses molecular modelling techniques to interpolate the structural changes
between two different protein conformers and to generate a set of intermediate structures.
A hyperlink pointing to the morph results is then emailed to the user.
The Morph Server was originally
primarily a research tool rather than general molecular animation tool, and thus offered
only limited user control over rendering, animation parameters, color, and point of view, and the original methods
sometimes required a fair amount of CPU time to completion. Since their
initial introduction in 1996, the database and associated morph server have undergone development
to try to address some of these shortcomings
as well
as add new features, such as Normal Mode Analysis.
Other research grounds have subsequently developed alternative systems, such as (MovieMaker ) from the University of Alberta.〔

抄文引用元・出典: フリー百科事典『 ウィキペディア(Wikipedia)
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